Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive3232804 - 3235674Not Available
Trna-ileNot AvailableNot AvailablePositive3236095 - 3236171Not Available
Trna-alaNot AvailableNot AvailablePositive3236197 - 3236272Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive3236422 - 3237887Not Available
protein-methionine-sulfoxide reductase heme-binding subunit msrqPhaeoP97_RS15505Not AvailableNegative3238742 - 323933822147.5
protein-methionine-sulfoxide reductase catalytic subunit msrpPhaeoP97_RS15510Not AvailableNegative3239338 - 324025833964.4
duf302 domain-containing proteinPhaeoP97_RS15515Not AvailablePositive3240626 - 324112017790.2
hypothetical proteinPhaeoP97_RS15520Not AvailablePositive3241207 - 324176420132.0
atp-dependent chaperone clpbPhaeoP97_RS15525Not AvailableNegative3241935 - 324455395270.1
orotidine-5'-phosphate decarboxylasePhaeoP97_RS15530Not AvailablePositive3244856 - 324557524660.8

Displaying genes 3291 – 3300 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.