Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class iv family proteinPhaeoP97_RS11465Not AvailableNegative2388830 - 238948323711.9
aminodeoxychorismate synthase component iPhaeoP97_RS11470Not AvailableNegative2389426 - 239057741860.6
carbamoyl-phosphate synthase large subunitPhaeoP97_RS11475Not AvailablePositive2390766 - 2394125121043.0
lysr substrate-binding domain-containing proteinPhaeoP97_RS11480Not AvailableNegative2394220 - 239510731522.9
serine hydroxymethyltransferasePhaeoP97_RS11485Not AvailablePositive2395221 - 239652845751.1
trypsin-like serine peptidasePhaeoP97_RS11490Not AvailableNegative2396658 - 239737125316.9
efflux rnd transporter permease subunitPhaeoP97_RS11495Not AvailableNegative2397959 - 2401003110110.0
efflux rnd transporter periplasmic adaptor subunitPhaeoP97_RS11500Not AvailableNegative2401015 - 240205836828.7
marr family winged helix-turn-helix transcriptional regulatorPhaeoP97_RS11505Not AvailableNegative2402062 - 240254718354.0
beta-ketoacyl-acp synthase iiiPhaeoP97_RS11510Not AvailablePositive2402746 - 240387040418.9

Displaying genes 2501 – 2510 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.