Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m48 family metalloproteasePhaeoP97_RS10015Not AvailablePositive2088693 - 209008149899.2
dsba family proteinPhaeoP97_RS10020Not AvailablePositive2090078 - 209085127784.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthasePhaeoP97_RS10025Not AvailableNegative2091056 - 209217739677.7
helix-turn-helix domain-containing proteinPhaeoP97_RS10030Not AvailableNegative2092379 - 209360543289.4
5-aminolevulinate synthasePhaeoP97_RS10035Not AvailableNegative2093737 - 209497244406.1
m20/m25/m40 family metallo-hydrolasePhaeoP97_RS10040Not AvailablePositive2095275 - 209666651298.4
Trna-aspNot AvailableNot AvailablePositive2096804 - 2096880Not Available
Trna-aspNot AvailableNot AvailablePositive2096968 - 2097044Not Available
Trna-aspNot AvailableNot AvailablePositive2097095 - 2097171Not Available
Trna-valNot AvailableNot AvailablePositive2097476 - 2097551Not Available

Displaying genes 2211 – 2220 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.