Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps-assembly protein lptdPhaeoP97_RS09770Not AvailablePositive2032846 - 203503581244.3
peptidylprolyl isomerasePhaeoP97_RS09775Not AvailablePositive2035020 - 203628545178.9
4-hydroxythreonine-4-phosphate dehydrogenase pdxaPhaeoP97_RS09780Not AvailablePositive2036282 - 203725934250.3
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaPhaeoP97_RS09785Not AvailablePositive2037382 - 203822730507.1
duf4167 domain-containing proteinPhaeoP97_RS09790Not AvailableNegative2038346 - 203907126470.2
peptide chain release factor n(5)-glutamine methyltransferasePhaeoP97_RS09795Not AvailableNegative2039296 - 204015330646.6
peptide chain release factor 1PhaeoP97_RS09800Not AvailableNegative2040150 - 204120539143.3
hypothetical proteinPhaeoP97_RS09805Not AvailablePositive2041372 - 204166510664.0
duf1499 domain-containing proteinPhaeoP97_RS09810Not AvailableNegative2041708 - 204213015687.8
agmatinasePhaeoP97_RS09815Not AvailableNegative2042175 - 204312233943.3

Displaying genes 2161 – 2170 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.