Phaeobacter porticola str. P97

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Phaeobacter

Description

Phaeobacter porticola str. P97 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having four replicons, which are circular DNA molecules that can include chromosomes and plasmids. The presence of multiple replicons may suggest a complex genetic architecture that could contribute to its adaptability and survival in diverse environments. The genomic data for Phaeobacter porticola str. P97 is available under several accession numbers: NZ_CP016366.1, NZ_CP016364.1, NZ_CP016368.1, and NZ_CP016369.1. These accessions provide a gateway to further research into its genetic makeup and functional capabilities. As a member of the Phaeobacter genus, P. porticola is likely to play a role in marine ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Its Gram-negative nature may also indicate that it possesses features such as an outer membrane, which can be linked to its ability to handle environmental stressors. In summary, the structural and genomic characteristics of Phaeobacter porticola str. P97 highlight its potential ecological significance. Understanding these traits may provide insights into its role within marine microbiomes, particularly in terms of its interactions with other microbial populations and its contributions to biogeochemical processes in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPhaeobacter
SpeciesPhaeobacter porticola
StrainP97

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phaeobacter porticola strain P97 plasmid pP97_d, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

51 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yqae/pmp3 family membrane proteinPhaeoP97_RS09720Not AvailablePositive2023773 - 20239436236.06
duf4112 domain-containing proteinPhaeoP97_RS09725Not AvailablePositive2023936 - 202445718753.2
nucleoside-diphosphate kinasePhaeoP97_RS09730Not AvailableNegative2024582 - 202500415058.8
abc-f family atp-binding cassette domain-containing proteinPhaeoP97_RS09735Not AvailablePositive2025247 - 202710068124.5
marc family proteinPhaeoP97_RS09740Not AvailablePositive2027100 - 202772021793.4
tigr02281 family clan aa aspartic proteasePhaeoP97_RS09745Not AvailablePositive2027788 - 202836921471.9
dna polymerase iii subunit chiPhaeoP97_RS09750Not AvailableNegative2028404 - 202886816994.1
leucyl aminopeptidasePhaeoP97_RS09755Not AvailableNegative2028889 - 203036451837.5
lps export abc transporter permease lptfPhaeoP97_RS09760Not AvailablePositive2030602 - 203174442184.6
lps export abc transporter permease lptgPhaeoP97_RS09765Not AvailablePositive2031741 - 203284439456.3

Displaying genes 2151 – 2160 of 3738 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.