Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein tran | BSY17_RS04690 | Not Available | Positive | 17105 - 18211 | 38816.2 |
| type-f conjugative transfer system pilin assembly protein trbc | BSY17_RS22105 | Not Available | Positive | 18537 - 19076 | 19116.2 |
| s26 family signal peptidase | BSY17_RS04700 | Not Available | Positive | 19048 - 19647 | 22300.3 |
| conjugal transfer protein traf | BSY17_RS04705 | Not Available | Positive | 19644 - 20546 | 33079.6 |
| hypothetical protein | BSY17_RS04710 | Not Available | Positive | 20621 - 21139 | 18572.5 |
| atp-binding protein | BSY17_RS04715 | Not Available | Negative | 21163 - 22329 | 42744.7 |
| conjugal transfer protein trah | BSY17_RS04720 | Not Available | Positive | 22437 - 23858 | 51334.9 |
| conjugal transfer protein trag n-terminal domain-containing protein | BSY17_RS04725 | Not Available | Positive | 23883 - 27635 | 131679.0 |
| fita-like ribbon-helix-helix domain-containing protein | BSY17_RS04735 | Not Available | Positive | 28214 - 28462 | 8919.44 |
| type ii toxin-antitoxin system vapc family toxin | BSY17_RS04740 | Not Available | Positive | 28462 - 28881 | 14529.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

