Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbc/virb2 family protein | BSY17_RS04285 | Not Available | Negative | 2293 - 2661 | 12821.1 |
| lytic transglycosylase domain-containing protein | BSY17_RS04290 | Not Available | Negative | 2658 - 3488 | 29106.7 |
| toprim domain-containing protein | BSY17_RS04300 | Not Available | Positive | 3980 - 4861 | 31886.3 |
| thermonuclease family protein | BSY17_RS04305 | Not Available | Positive | 4858 - 5493 | 22761.2 |
| hypothetical protein | BSY17_RS04310 | Not Available | Positive | 5553 - 5813 | 9387.99 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | BSY17_RS04315 | Not Available | Positive | 5872 - 6144 | 9653.62 |
| type ii toxin-antitoxin system pemk/mazf family toxin | BSY17_RS04320 | Not Available | Negative | 6495 - 6911 | 15173.5 |
| helix-turn-helix domain-containing protein | BSY17_RS04325 | Not Available | Negative | 6913 - 7392 | 18162.0 |
| ardc family protein | BSY17_RS04330 | Not Available | Positive | 8093 - 9028 | 34289.3 |
| heavy metal translocating p-type atpase | BSY17_RS04335 | Not Available | Negative | 9156 - 11684 | 88455.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

