Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | BSY17_RS01555 | Not Available | Negative | 335997 - 336935 | 34111.6 |
| class iii extradiol dioxygenase subunit beta | BSY17_RS01560 | Not Available | Negative | 337027 - 337923 | 32989.4 |
| protocatechuate 4,5-dioxygenase subunit alpha | BSY17_RS01565 | Not Available | Negative | 337925 - 338377 | 17347.5 |
| amidohydrolase family protein | BSY17_RS01570 | Not Available | Negative | 338374 - 339396 | 37859.4 |
| nad(p)-dependent oxidoreductase | BSY17_RS01575 | Not Available | Negative | 339486 - 340433 | 32603.4 |
| lysr substrate-binding domain-containing protein | BSY17_RS01580 | Not Available | Negative | 340498 - 341649 | 41162.4 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | BSY17_RS01585 | Not Available | Positive | 341756 - 342430 | 23634.7 |
| 4-oxalomesaconate tautomerase | BSY17_RS01590 | Not Available | Positive | 342423 - 343487 | 37123.6 |
| amidohydrolase family protein | BSY17_RS01595 | Not Available | Positive | 343598 - 344476 | 32388.5 |
| carboxylesterase/lipase family protein | BSY17_RS01600 | Not Available | Negative | 344489 - 345952 | 51912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

