Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc family protein | BSY17_RS01205 | Not Available | Positive | 263255 - 263923 | 24642.9 |
| abrb/maze/spovt family dna-binding domain-containing protein | BSY17_RS21775 | Not Available | Positive | 263993 - 264736 | 27282.9 |
| type ii toxin-antitoxin system vapc family toxin | BSY17_RS01215 | Not Available | Positive | 264729 - 265118 | 13815.5 |
| nucleotidyltransferase and hepn domain-containing protein | BSY17_RS01220 | Not Available | Positive | 265146 - 266075 | 35751.6 |
| rna polymerase sigma factor | BSY17_RS01225 | Not Available | Positive | 266105 - 266881 | 29594.7 |
| fecr domain-containing protein | BSY17_RS01230 | Not Available | Positive | 266878 - 267954 | 39168.7 |
| tonb-dependent receptor domain-containing protein | BSY17_RS01235 | Not Available | Positive | 268006 - 270606 | 92515.8 |
| atxe2 family lasso peptide isopeptidase | BSY17_RS01240 | Not Available | Positive | 270608 - 272716 | 78610.3 |
| asparagine synthase-related protein | BSY17_RS20735 | Not Available | Negative | 272765 - 274513 | 64012.3 |
| lasso peptide biosynthesis b2 protein | BSY17_RS01245 | Not Available | Negative | 274513 - 275187 | 24971.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

