Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0149 family protein | BSY17_RS01155 | Not Available | Positive | 256129 - 256794 | 24930.7 |
| type ii toxin-antitoxin system vapc family toxin | BSY17_RS01160 | Not Available | Negative | 256867 - 257265 | 14151.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | BSY17_RS01165 | Not Available | Negative | 257262 - 257519 | 9122.89 |
| parb/repb/spo0j family partition protein | BSY17_RS01170 | Not Available | Negative | 257631 - 259670 | 74437.3 |
| hu family dna-binding protein | BSY17_RS01175 | Not Available | Positive | 259819 - 260094 | 9518.35 |
| toprim domain-containing protein | BSY17_RS21770 | Not Available | Negative | 260151 - 260606 | 16523.3 |
| sigma factor-like helix-turn-helix dna-binding protein | BSY17_RS20730 | Not Available | Negative | 261056 - 261544 | 18000.7 |
| helix-turn-helix transcriptional regulator | BSY17_RS01190 | Not Available | Positive | 261902 - 262453 | 20027.0 |
| hypothetical protein | BSY17_RS01195 | Not Available | Positive | 262513 - 262857 | 12110.6 |
| hypothetical protein | BSY17_RS01200 | Not Available | Positive | 262854 - 263351 | 18060.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

