Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | BSY17_RS16615 | Not Available | Positive | 2481631 - 2484309 | 99090.0 |
| omph family outer membrane protein | BSY17_RS16620 | Not Available | Positive | 2484309 - 2484950 | 22174.7 |
| 3-hydroxyacyl-acp dehydratase fabz | BSY17_RS16625 | Not Available | Positive | 2484956 - 2485432 | 16991.1 |
| 50s ribosomal protein l31 | BSY17_RS16630 | Not Available | Positive | 2485665 - 2485889 | 8252.76 |
| 3-dehydroquinate synthase | BSY17_RS16635 | Not Available | Negative | 2486062 - 2487168 | 38741.4 |
| shikimate kinase | BSY17_RS16640 | Not Available | Negative | 2487159 - 2487707 | 20171.5 |
| hypothetical protein | BSY17_RS16645 | Not Available | Positive | 2487790 - 2487978 | 6951.66 |
| hypothetical protein | BSY17_RS16650 | Not Available | Positive | 2487984 - 2489813 | 63918.2 |
| tyrosine recombinase | BSY17_RS16655 | Not Available | Positive | 2489816 - 2490733 | 32921.9 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | BSY17_RS16660 | Not Available | Positive | 2490744 - 2491688 | 33370.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

