Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | BSY17_RS12585 | Not Available | Negative | 1662025 - 1662801 | 28256.5 |
| methanol/ethanol family pqq-dependent dehydrogenase | BSY17_RS12590 | Not Available | Negative | 1662815 - 1664557 | 62509.1 |
| abc transporter substrate-binding protein | BSY17_RS12595 | Not Available | Negative | 1664700 - 1665569 | 30829.0 |
| cytochrome c-550 pedf | BSY17_RS12600 | Not Available | Negative | 1665576 - 1666004 | 15344.0 |
| pqq-dependent catabolism-associated beta-propeller protein | BSY17_RS12605 | Not Available | Positive | 1666181 - 1667143 | 33851.5 |
| porin | BSY17_RS12610 | Not Available | Positive | 1667257 - 1668654 | 48121.6 |
| tonb-dependent receptor | BSY17_RS12615 | Not Available | Positive | 1668768 - 1670756 | 70608.7 |
| acetate--coa ligase | BSY17_RS12620 | Not Available | Positive | 1670768 - 1672726 | 71202.7 |
| tonb-dependent receptor | BSY17_RS12625 | Not Available | Positive | 1672799 - 1675117 | 81979.4 |
| quinoprotein relay system zinc metallohydrolase 1 | BSY17_RS12630 | Not Available | Negative | 1675114 - 1676061 | 33616.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

