Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdc48 family aaa atpase | BSY17_RS12200 | Not Available | Positive | 1568357 - 1570648 | 83683.9 |
| class i sam-dependent methyltransferase | BSY17_RS12205 | Not Available | Positive | 1570792 - 1571427 | 23610.7 |
| glutamate-5-semialdehyde dehydrogenase | BSY17_RS12210 | Not Available | Positive | 1571501 - 1572766 | 44010.6 |
| 3-deoxy-8-phosphooctulonate synthase | BSY17_RS12215 | Not Available | Negative | 1572960 - 1573787 | 28657.5 |
| hypothetical protein | BSY17_RS12220 | Not Available | Negative | 1573793 - 1574086 | 11433.7 |
| hypothetical protein | BSY17_RS12225 | Not Available | Positive | 1574108 - 1575244 | 42014.2 |
| cytochrome p450 | BSY17_RS12230 | Not Available | Positive | 1575241 - 1576614 | 51243.1 |
| transglutaminase family protein | BSY17_RS12235 | Not Available | Negative | 1576622 - 1577518 | 31972.6 |
| circularly permuted type 2 atp-grasp protein | BSY17_RS12240 | Not Available | Negative | 1577515 - 1579989 | 88840.2 |
| duf2126 domain-containing protein | BSY17_RS12245 | Not Available | Negative | 1579989 - 1583348 | 123968.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

