Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. RAC03 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. RAC03 plasmid pBSY17_4, complete sequence.
Gene Summary
Adenine Count
9470 bp
Thymine Count
9669 bp
Guanine Count
15180 bp
Cytosine Count
15418 bp
Genome Length
49737 bp
Protein-coding Genes
49 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BSY17_RS08935 | Not Available | Positive | 895935 - 896867 | 32987.6 |
| fumarylacetoacetate hydrolase family protein | BSY17_RS08940 | Not Available | Positive | 896990 - 899153 | 77594.5 |
| hypothetical protein | BSY17_RS21545 | Not Available | Negative | 899209 - 899382 | 6469.62 |
| short-chain fatty acyl-coa regulator family protein | BSY17_RS08945 | Not Available | Positive | 899521 - 900930 | 51557.0 |
| retron st85 family rna-directed dna polymerase | BSY17_RS20910 | Not Available | Negative | 901220 - 902149 | 34561.9 |
| retron st85 family effector protein | BSY17_RS21255 | Not Available | Negative | 902146 - 903054 | 33641.4 |
| cold-shock protein | BSY17_RS22085 | Not Available | Negative | 903540 - 904412 | 28880.4 |
| ribonuclease d | BSY17_RS08960 | Not Available | Positive | 904671 - 905288 | 22986.5 |
| lps export abc transporter periplasmic protein lptc | BSY17_RS08965 | Not Available | Positive | 905304 - 905951 | 23460.0 |
| lpta/osta family protein | BSY17_RS08970 | Not Available | Positive | 905951 - 906502 | 18848.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

