Rhodoferax koreense str. DCY110

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax koreense str. DCY110 is a Gram-negative, rod-shaped bacterium distinguished by the presence of flagella. This motility structure enables the organism to navigate its environment effectively. The strain has a single replicon, indicating a streamlined genetic organization, which can be advantageous for its adaptability and survival in various ecological niches. The genomic sequence of Rhodoferax koreense str. DCY110 is cataloged under the accession NZ_CP019236.1, which provides a basis for further research into its genetic and metabolic capabilities. As a member of the Rhodoferax genus, this bacterium is likely involved in biogeochemical cycles, particularly in anaerobic environments where it may play a role in processes such as the degradation of organic matter and the cycling of nutrients. The presence of flagella suggests that Rhodoferax koreense str. DCY110 may exhibit motility that allows it to exploit various ecological niches, potentially contributing to its role in microbial communities. Understanding the characteristics of this strain can provide insights into its ecological functions, particularly in environments where anaerobic processes are prevalent. Further exploration of its metabolic pathways and interactions with other microorganisms could reveal its significance in ecological balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax koreensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax koreense str. DCY110
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax koreense strain DCY-110 chromosome, complete genome.

Gene Summary

Adenine Count

978004 bp

Thymine Count

984090 bp

Guanine Count

1923995 bp

Cytosine Count

1914384 bp

Genome Length

5800473 bp

Protein-coding Genes

5257 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative dna primase-helicaseRD110_RS08005Not AvailablePositive1696820 - 169865268787.8
hypothetical proteinRD110_RS08010Not AvailablePositive1698633 - 169891710562.5
hypothetical proteinRD110_RS08015Not AvailablePositive1698914 - 169927914079.2
Bbp26RD110_RS08020Not AvailablePositive1699276 - 169975217235.5
Terminase large subunitRD110_RS08025Not AvailablePositive1699749 - 170129058108.3
AttrNot AvailableNot AvailablePositive1700338 - 1700353Not Available
Putative head morphogenesis proteinRD110_RS10890Not AvailablePositive2310888 - 231181134435.9
Hypothetical proteinRD110_RS10895Not AvailablePositive2311811 - 231260229396.7
Hypothetical proteinRD110_RS10900Not AvailablePositive2312589 - 231335627773.2
hypothetical proteinRD110_RS27900Not AvailablePositive2313353 - 23135176107.39

Displaying genes 31 – 40 of 5418 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.