Blastomonas sp. RAC04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Blastomonadaceae

Genus

Blastomonas

Description

Blastomonas sp. RAC04 is characterized by having a total of five replicons, which include multiple plasmids or chromosomal components that contribute to its genetic diversity and adaptability. The organism is documented under several accessions, specifically NZ_CP016458.1, NZ_CP016460.1, NZ_CP016459.1, NZ_CP016461.1, and NZ_CP016462.1. These accessions provide a repository of genetic information that can be utilized for further studies and comparisons within the broader context of microbial genomics. The presence of multiple replicons can suggest a complex regulatory mechanism and potential for horizontal gene transfer, which may enhance the organism's ability to adapt to various environmental conditions. This trait can confer advantages such as antibiotic resistance or metabolic versatility, allowing Blastomonas sp. RAC04 to thrive in diverse ecosystems. From an ecological perspective, the genetic adaptability indicated by multiple replicons may play a significant role in the organism's survival in fluctuating environments, possibly making it an important player in microbial communities. Understanding the genetic framework of Blastomonas sp. RAC04 could provide insights into its ecological functions and interactions within its habitat, highlighting the significance of genetic diversity in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyBlastomonadaceae
GenusBlastomonas
SpeciesBlastomonas sp. RAC04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Blastomonas sp. RAC04 plasmid pBSY18_2, complete sequence.

Gene Summary

Adenine Count

30888 bp

Thymine Count

30250 bp

Guanine Count

45172 bp

Cytosine Count

46007 bp

Genome Length

152317 bp

Protein-coding Genes

150 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadph-dependent f420 reductaseBSY18_RS13160Not AvailableNegative2607157 - 260780721726.4
5-amino-6-(d-ribitylamino)uracil--l-tyrosine 4-hydroxyphenyl transferase cofhBSY18_RS13165Not AvailableNegative2607823 - 261014184566.3
3-keto-5-aminohexanoate cleavage proteinBSY18_RS13170Not AvailableNegative2610219 - 261114833887.9
luxr c-terminal-related transcriptional regulatorBSY18_RS13175Not AvailableNegative2611253 - 261379394424.3
acyl-coa dehydrogenase family proteinBSY18_RS13180Not AvailablePositive2614142 - 261530542674.2
alcohol dehydrogenase catalytic domain-containing proteinBSY18_RS13185Not AvailablePositive2615327 - 261632834783.1
sdr family oxidoreductaseBSY18_RS13190Not AvailablePositive2616325 - 261710426531.2
class i adenylate-forming enzyme family proteinBSY18_RS13195Not AvailablePositive2617246 - 261888659474.5
sdr family nad(p)-dependent oxidoreductaseBSY18_RS13200Not AvailablePositive2618897 - 261967926111.3
fumarylacetoacetate hydrolase family proteinBSY18_RS13205Not AvailablePositive2619699 - 262053829283.1

Displaying genes 2671 – 2680 of 4174 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001789(3R)-citramalateC5H6O5Chemical structure of (3R)-citramalateNot available
Average146.099Da
Monoisotopic146.0226205Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0006172(R)-malyl-CoAC25H35N7O20P3SChemical structure of (R)-malyl-CoANot available
Average878.57Da
Monoisotopic878.089786623Da
BASm0008580carboxy-S-adenosyl-L-methionineC16H22N6O7SChemical structure of carboxy-S-adenosyl-L-methionineNot available
Average442.45Da
Monoisotopic442.1270682Da

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.