Sinorhizobium sp. RAC02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium sp. RAC02 is a bacterium notable for its flagellated structure, which enables motility. This characteristic is significant for its ecological interactions, particularly in soil environments where movement can aid in colonization and interaction with plant roots. The genome of Sinorhizobium sp. RAC02 is comprised of three replicons, which suggests a complex genomic organization that may contribute to its adaptability and functionality in various ecological niches. The presence of multiple replicons can enhance genetic exchange and potentially facilitate the bacterium's responses to environmental changes. The strain is represented by several genomic accessions, namely NZ_CP016450.1, NZ_CP016451.1, and NZ_CP016452.1. These accessions provide a basis for further study into the genetic and metabolic pathways that characterize Sinorhizobium sp. RAC02. Overall, the combination of motility due to flagella and the presence of multiple replicons indicates that Sinorhizobium sp. RAC02 is well-equipped for its ecological role, likely involving interactions with plant species, particularly in symbiotic relationships that enhance nitrogen fixation in agricultural settings. This highlights the potential importance of Sinorhizobium sp. RAC02 in sustainable agriculture and soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium sp. RAC02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium sp. RAC02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence.

Gene Summary

Adenine Count

421832 bp

Thymine Count

418441 bp

Guanine Count

689572 bp

Cytosine Count

690315 bp

Genome Length

2220160 bp

Protein-coding Genes

2089 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter atp-binding proteinBSY16_RS12640Not AvailableNegative2623162 - 262465853828.4
rhamnose abc transporter substrate-binding proteinBSY16_RS12645Not AvailableNegative2624878 - 262586434231.4
deor/glpr family dna-binding transcription regulatorBSY16_RS12650Not AvailableNegative2625900 - 262671229868.2
bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenaseBSY16_RS12655Not AvailablePositive2626934 - 262902775610.2
l-rhamnose catabolism isomeraseBSY16_RS12660Not AvailablePositive2629045 - 263032846848.4
glsb/yeaq/ymge family stress response membrane proteinBSY16_RS12665Not AvailablePositive2630422 - 26306768445.05
hydroxyacid dehydrogenaseBSY16_RS12670Not AvailableNegative2630730 - 263176137129.1
hypothetical proteinBSY16_RS12675Not AvailableNegative2631820 - 263209810256.2
ribonuclease dBSY16_RS12680Not AvailablePositive2632209 - 263283523015.4
duf817 domain-containing proteinBSY16_RS12685Not AvailablePositive2632844 - 263371633471.9

Displaying genes 4661 – 4670 of 6373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.