Sinorhizobium sp. RAC02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium sp. RAC02 is a bacterium notable for its flagellated structure, which enables motility. This characteristic is significant for its ecological interactions, particularly in soil environments where movement can aid in colonization and interaction with plant roots. The genome of Sinorhizobium sp. RAC02 is comprised of three replicons, which suggests a complex genomic organization that may contribute to its adaptability and functionality in various ecological niches. The presence of multiple replicons can enhance genetic exchange and potentially facilitate the bacterium's responses to environmental changes. The strain is represented by several genomic accessions, namely NZ_CP016450.1, NZ_CP016451.1, and NZ_CP016452.1. These accessions provide a basis for further study into the genetic and metabolic pathways that characterize Sinorhizobium sp. RAC02. Overall, the combination of motility due to flagella and the presence of multiple replicons indicates that Sinorhizobium sp. RAC02 is well-equipped for its ecological role, likely involving interactions with plant species, particularly in symbiotic relationships that enhance nitrogen fixation in agricultural settings. This highlights the potential importance of Sinorhizobium sp. RAC02 in sustainable agriculture and soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium sp. RAC02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium sp. RAC02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence.

Gene Summary

Adenine Count

421832 bp

Thymine Count

418441 bp

Guanine Count

689572 bp

Cytosine Count

690315 bp

Genome Length

2220160 bp

Protein-coding Genes

2089 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dde-type integrase/transposase/recombinaseBSY16_RS31810Not AvailableNegative2097141 - 20973567502.88
abc transporter atp-binding proteinBSY16_RS30765Not AvailableNegative2097353 - 209835436345.1
carbohydrate abc transporter permeaseBSY16_RS30770Not AvailableNegative2098378 - 209920230158.8
carbohydrate abc transporter permeaseBSY16_RS30775Not AvailableNegative2099272 - 210014431812.8
d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunitBSY16_RS30780Not AvailableNegative2100198 - 210147244489.9
sugar kinaseBSY16_RS30785Not AvailableNegative2101469 - 210245833603.2
sugar abc transporter substrate-binding proteinBSY16_RS30790Not AvailablePositive2102781 - 210409447794.6
l-iditol 2-dehydrogenaseBSY16_RS30795Not AvailablePositive2104235 - 210500526928.4
zinc-dependent alcohol dehydrogenase family proteinBSY16_RS30800Not AvailablePositive2105021 - 210603135118.4
laci family dna-binding transcriptional regulatorBSY16_RS30805Not AvailablePositive2106147 - 210715737274.5

Displaying genes 1981 – 1990 of 6373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.