Sinorhizobium sp. RAC02

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Sinorhizobium

Description

Sinorhizobium sp. RAC02 is a bacterium notable for its flagellated structure, which enables motility. This characteristic is significant for its ecological interactions, particularly in soil environments where movement can aid in colonization and interaction with plant roots. The genome of Sinorhizobium sp. RAC02 is comprised of three replicons, which suggests a complex genomic organization that may contribute to its adaptability and functionality in various ecological niches. The presence of multiple replicons can enhance genetic exchange and potentially facilitate the bacterium's responses to environmental changes. The strain is represented by several genomic accessions, namely NZ_CP016450.1, NZ_CP016451.1, and NZ_CP016452.1. These accessions provide a basis for further study into the genetic and metabolic pathways that characterize Sinorhizobium sp. RAC02. Overall, the combination of motility due to flagella and the presence of multiple replicons indicates that Sinorhizobium sp. RAC02 is well-equipped for its ecological role, likely involving interactions with plant species, particularly in symbiotic relationships that enhance nitrogen fixation in agricultural settings. This highlights the potential importance of Sinorhizobium sp. RAC02 in sustainable agriculture and soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusSinorhizobium
SpeciesSinorhizobium sp. RAC02
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sinorhizobium sp. RAC02
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence.

Gene Summary

Adenine Count

421832 bp

Thymine Count

418441 bp

Guanine Count

689572 bp

Cytosine Count

690315 bp

Genome Length

2220160 bp

Protein-coding Genes

2089 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ectoine utilization protein eutaBSY16_RS28705Not AvailableNegative1655234 - 165601027300.0
ectoine/hydroxyectoine abc transporter permease subunit ehudBSY16_RS28710Not AvailableNegative1656010 - 165667224671.0
ectoine/hydroxyectoine abc transporter permease subunit ehucBSY16_RS28715Not AvailableNegative1656675 - 165733423803.0
ectoine/hydroxyectoine abc transporter substrate-binding protein ehubBSY16_RS28720Not AvailableNegative1657544 - 165839529634.5
ectoine/hydroxyectoine abc transporter atp-binding protein ehuaBSY16_RS28725Not AvailableNegative1658452 - 165923728985.9
plp-dependent aminotransferase family proteinBSY16_RS28730Not AvailableNegative1659360 - 166078151815.7
lrp/asnc family transcriptional regulatorBSY16_RS28735Not AvailablePositive1660848 - 166133017813.8
nad-dependent succinate-semialdehyde dehydrogenaseBSY16_RS28740Not AvailablePositive1661461 - 166295753184.0
aspartate aminotransferase family proteinBSY16_RS28745Not AvailablePositive1662992 - 166436549537.2
arge/dape family deacylaseBSY16_RS28750Not AvailablePositive1664437 - 166592453734.4

Displaying genes 1561 – 1570 of 6373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.