Pelobium manganitolerans str. YS-25

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pelobium

Description

Pelobium manganitolerans strain YS-25 is a Gram-negative bacterium characterized by its rod shape and mesophilic nature, with an optimal growth temperature of 29°C. This organism exhibits a facultative aerobic/anaerobic metabolism, allowing it to thrive in both oxygen-rich and oxygen-deprived environments. The genetic information for Pelobium manganitolerans str. YS-25 is contained within a single replicon, indicating a streamlined genomic structure. The accession number for its genomic data is MBTA00000000.1. The ability of Pelobium manganitolerans to tolerate manganese suggests potential ecological roles in environments with elevated levels of this metal. This trait may enable the bacterium to participate in biogeochemical cycling of manganese and other elements, contributing to nutrient availability and ecological balance in its habitat. Such characteristics underscore the importance of microbial diversity in bioremediation processes and ecosystem functioning, particularly in environments impacted by metal contamination.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPelobium
SpeciesPelobium manganitolerans
StrainYS-25

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelobium manganitolerans strain YS-25 Y5-25_scaffold9, whole

Gene Summary

Adenine Count

1159025 bp

Thymine Count

1143484 bp

Guanine Count

824805 bp

Cytosine Count

805451 bp

Genome Length

3932770 bp

Protein-coding Genes

3341 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdenum abc transporter atp-binding proteinBCY91_14760Not AvailablePositive988105 - 98955053634.9
2-isopropylmalate synthaseBCY91_14765Not AvailablePositive989567 - 99108155520.3
3-isopropylmalate dehydratase large subunitBCY91_14770Not AvailablePositive991381 - 99277850201.1
3-isopropylmalate dehydratase small subunitBCY91_14775Not AvailablePositive992957 - 99355322406.5
2-isopropylmalate synthaseBCY91_14780Not AvailablePositive993577 - 99512457268.7
3-isopropylmalate dehydrogenaseBCY91_14785Not AvailablePositive995276 - 99633438374.8
hypothetical proteinBCY91_14790Not AvailablePositive996585 - 99824965012.1
susc/raga family tonb-linked outer membrane proteinBCY91_14795Not AvailablePositive998799 - 1001795110146.0
hypothetical proteinBCY91_14800Not AvailablePositive1001884 - 100337155481.8
duf5116 domain-containing proteinBCY91_14805Not AvailablePositive1003390 - 100486553800.5

Displaying genes 831 – 840 of 3392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.