Pelobium manganitolerans str. YS-25

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pelobium

Description

Pelobium manganitolerans strain YS-25 is a Gram-negative bacterium characterized by its rod shape and mesophilic nature, with an optimal growth temperature of 29°C. This organism exhibits a facultative aerobic/anaerobic metabolism, allowing it to thrive in both oxygen-rich and oxygen-deprived environments. The genetic information for Pelobium manganitolerans str. YS-25 is contained within a single replicon, indicating a streamlined genomic structure. The accession number for its genomic data is MBTA00000000.1. The ability of Pelobium manganitolerans to tolerate manganese suggests potential ecological roles in environments with elevated levels of this metal. This trait may enable the bacterium to participate in biogeochemical cycling of manganese and other elements, contributing to nutrient availability and ecological balance in its habitat. Such characteristics underscore the importance of microbial diversity in bioremediation processes and ecosystem functioning, particularly in environments impacted by metal contamination.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPelobium
SpeciesPelobium manganitolerans
StrainYS-25

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelobium manganitolerans strain YS-25 Y5-25_scaffold9, whole

Gene Summary

Adenine Count

1159025 bp

Thymine Count

1143484 bp

Guanine Count

824805 bp

Cytosine Count

805451 bp

Genome Length

3932770 bp

Protein-coding Genes

3341 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolaseBCY91_06920Not AvailableNegative2581642 - 258404490571.6
glycosylaseBCY91_06925Not AvailableNegative2584044 - 258512341968.8
alpha-l-rhamnosidaseBCY91_06930Not AvailableNegative2585158 - 2587884101390.0
iclr family transcriptional regulatorBCY91_06935Not AvailablePositive2588162 - 258893829117.2
phosphoribosyltransferaseBCY91_06940Not AvailablePositive2589005 - 258951419062.2
chromosome segregation protein smcBCY91_06945Not AvailablePositive2589648 - 2593184135203.0
ssra-binding proteinBCY91_06950Not AvailablePositive2593307 - 259376217456.4
protein-l-isoaspartate o-methyltransferaseBCY91_06955Not AvailableNegative2593973 - 259462924485.8
hypothetical proteinBCY91_06960Not AvailablePositive2594729 - 259608752064.8
hypothetical proteinBCY91_06965Not AvailablePositive2596115 - 259679225480.3

Displaying genes 2241 – 2250 of 3392 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.