Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | Verru16B_RS04825 | Not Available | Positive | 1162153 - 1162845 | 24681.8 |
| transglutaminase-like domain-containing protein | Verru16B_RS04830 | Not Available | Positive | 1162939 - 1163808 | 32283.6 |
| shikimate dehydrogenase | Verru16B_RS04835 | Not Available | Positive | 1163940 - 1164848 | 31026.5 |
| a24 family peptidase | Verru16B_RS04840 | Not Available | Positive | 1164845 - 1165756 | 32849.9 |
| hypothetical protein | Verru16B_RS04845 | Not Available | Negative | 1165748 - 1165957 | 7337.96 |
| folate-binding protein ygfz | Verru16B_RS04850 | Not Available | Negative | 1165950 - 1166777 | 28943.1 |
| 3-deoxy-7-phosphoheptulonate synthase | Verru16B_RS04855 | Not Available | Positive | 1167102 - 1168157 | 38067.0 |
| malate dehydrogenase | Verru16B_RS04860 | Not Available | Positive | 1168263 - 1169246 | 34365.7 |
| hypothetical protein | Verru16B_RS04865 | Not Available | Negative | 1169380 - 1170084 | 25173.2 |
| hypothetical protein | Verru16B_RS04870 | Not Available | Negative | 1170247 - 1170510 | 8968.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
