Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | Verru16B_RS04680 | Not Available | Positive | 1137826 - 1138245 | 14654.8 |
| hypothetical protein | Verru16B_RS04685 | Not Available | Negative | 1138283 - 1138678 | 14398.2 |
| aldehyde dehydrogenase | Verru16B_RS04690 | Not Available | Negative | 1138680 - 1139546 | 30891.3 |
| pot family mfs transporter | Verru16B_RS04695 | Not Available | Negative | 1139559 - 1140923 | 50149.1 |
| zinc ribbon domain-containing protein | Verru16B_RS04700 | Not Available | Negative | 1140929 - 1141192 | 9496.26 |
| aldehyde dehydrogenase family protein | Verru16B_RS04705 | Not Available | Negative | 1141197 - 1142696 | 53699.8 |
| deoxyribose-phosphate aldolase | Verru16B_RS04710 | Not Available | Negative | 1142785 - 1143723 | 33716.7 |
| hypothetical protein | Verru16B_RS04715 | Not Available | Positive | 1143830 - 1144378 | 19937.2 |
| acyl-coa thioesterase | Verru16B_RS04720 | Not Available | Positive | 1144404 - 1144793 | 14071.9 |
| nuclear transport factor 2 family protein | Verru16B_RS04725 | Not Available | Positive | 1144810 - 1145274 | 16759.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
