Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | Verru16B_RS04635 | Not Available | Negative | 1129647 - 1130393 | 27575.0 |
| hypothetical protein | Verru16B_RS04640 | Not Available | Negative | 1130789 - 1131277 | 18447.7 |
| abc transporter permease | Verru16B_RS04645 | Not Available | Negative | 1131553 - 1132773 | 43532.6 |
| atp-binding cassette domain-containing protein | Verru16B_RS04650 | Not Available | Negative | 1132784 - 1133545 | 27425.5 |
| hypothetical protein | Verru16B_RS18235 | Not Available | Negative | 1133548 - 1133715 | 5503.88 |
| lyttr family dna-binding domain-containing protein | Verru16B_RS04655 | Not Available | Negative | 1133723 - 1134451 | 27593.4 |
| sensor histidine kinase | Verru16B_RS04660 | Not Available | Negative | 1134448 - 1135659 | 44574.5 |
| ribokinase | Verru16B_RS04665 | Not Available | Positive | 1135838 - 1136794 | 33664.7 |
| voc family protein | Verru16B_RS04670 | Not Available | Negative | 1136820 - 1137212 | 13351.2 |
| ydei/ompd-associated family protein | Verru16B_RS04675 | Not Available | Positive | 1137287 - 1137775 | 18257.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
