Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectonucleotide pyrophosphatase/phosphodiesterase | Verru16B_RS04585 | Not Available | Positive | 1113993 - 1115219 | 44619.5 |
| pled family two-component system response regulator | Verru16B_RS04590 | Not Available | Negative | 1115224 - 1115826 | 22396.9 |
| pas domain s-box protein | Verru16B_RS04595 | Not Available | Negative | 1115823 - 1121420 | 204907.0 |
| thioredoxin domain-containing protein | Verru16B_RS04600 | Not Available | Negative | 1121496 - 1123760 | 82512.6 |
| nad(p)-dependent oxidoreductase | Verru16B_RS04605 | Not Available | Positive | 1123876 - 1124742 | 31627.9 |
| ribosomal protection-like abc-f family protein | Verru16B_RS04610 | Not Available | Positive | 1124911 - 1126767 | 68615.6 |
| helix-turn-helix domain-containing protein | Verru16B_RS04615 | Not Available | Negative | 1126799 - 1127149 | 12578.3 |
| dinb family protein | Verru16B_RS04620 | Not Available | Positive | 1127216 - 1127824 | 21469.3 |
| mfs transporter | Verru16B_RS04625 | Not Available | Positive | 1127821 - 1129212 | 47407.7 |
| antibiotic biosynthesis monooxygenase | Verru16B_RS04630 | Not Available | Negative | 1129213 - 1129548 | 12410.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
