Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme a synthase | Verru16B_RS00410 | Not Available | Positive | 91344 - 92306 | 34982.8 |
| heme o synthase | Verru16B_RS00415 | Not Available | Positive | 92303 - 93214 | 33352.6 |
| duf420 domain-containing protein | Verru16B_RS00420 | Not Available | Positive | 93248 - 93691 | 16251.2 |
| plastocyanin/azurin family copper-binding protein | Verru16B_RS00425 | Not Available | Negative | 93927 - 94439 | 17831.9 |
| cytochrome c oxidase subunit ii | Verru16B_RS00430 | Not Available | Positive | 94646 - 95944 | 46930.2 |
| cytochrome c oxidase subunit i | Verru16B_RS00435 | Not Available | Positive | 96047 - 98062 | 74541.9 |
| heme-copper oxidase subunit iii | Verru16B_RS00440 | Not Available | Positive | 98108 - 98941 | 30364.3 |
| cytochrome c oxidase subunit iv family protein | Verru16B_RS00445 | Not Available | Positive | 98989 - 99342 | 12861.2 |
| tetratricopeptide repeat protein | Verru16B_RS00450 | Not Available | Negative | 99412 - 101211 | 64511.2 |
| vcbs repeat-containing protein | Verru16B_RS00455 | Not Available | Negative | 101196 - 102500 | 46982.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
