Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | Verru16B_RS04285 | Not Available | Negative | 1050790 - 1051314 | 20094.6 |
| l-glutamate gamma-semialdehyde dehydrogenase | Verru16B_RS04290 | Not Available | Positive | 1051596 - 1054577 | 108171.0 |
| nramp family divalent metal transporter | Verru16B_RS04295 | Not Available | Negative | 1054584 - 1055894 | 47093.9 |
| cation acetate symporter | Verru16B_RS04300 | Not Available | Negative | 1055968 - 1057722 | 62671.0 |
| duf485 domain-containing protein | Verru16B_RS04305 | Not Available | Negative | 1057722 - 1058030 | 11727.6 |
| hdod domain-containing protein | Verru16B_RS04310 | Not Available | Negative | 1058111 - 1058953 | 29816.6 |
| hypothetical protein | Verru16B_RS04315 | Not Available | Negative | 1059083 - 1059835 | 28465.4 |
| phosphoenolpyruvate carboxykinase (gtp) | Verru16B_RS04320 | Not Available | Negative | 1059899 - 1061725 | 68025.0 |
| cation diffusion facilitator family transporter | Verru16B_RS04325 | Not Available | Negative | 1061908 - 1062816 | 31966.6 |
| acetolactate synthase | Verru16B_RS04330 | Not Available | Positive | 1062905 - 1063360 | 16870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
