Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | Verru16B_RS04235 | Not Available | Negative | 1037791 - 1038213 | 15758.5 |
| duf423 domain-containing protein | Verru16B_RS04240 | Not Available | Positive | 1038408 - 1038791 | 13267.6 |
| cca trna nucleotidyltransferase | Verru16B_RS04245 | Not Available | Positive | 1038788 - 1040188 | 51373.7 |
| transaldolase | Verru16B_RS04250 | Not Available | Positive | 1040210 - 1041160 | 34637.9 |
| family 20 glycosylhydrolase | Verru16B_RS04255 | Not Available | Positive | 1041256 - 1043199 | 72990.9 |
| tonb-dependent receptor | Verru16B_RS04260 | Not Available | Positive | 1043450 - 1046329 | 104841.0 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | Verru16B_RS04265 | Not Available | Negative | 1046632 - 1047759 | 39538.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | Verru16B_RS04270 | Not Available | Negative | 1047832 - 1048320 | 16766.7 |
| rdd family protein | Verru16B_RS04275 | Not Available | Negative | 1048416 - 1050176 | 61405.2 |
| hypothetical protein | Verru16B_RS04280 | Not Available | Negative | 1050187 - 1050768 | 21083.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
