Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rsmd family rna methyltransferase | Verru16B_RS04135 | Not Available | Negative | 1013563 - 1014132 | 19838.2 |
| hypothetical protein | Verru16B_RS04140 | Not Available | Positive | 1014328 - 1015791 | 56448.8 |
| abc transporter permease | Verru16B_RS04145 | Not Available | Positive | 1015788 - 1016546 | 27362.5 |
| abc transporter atp-binding protein | Verru16B_RS04150 | Not Available | Positive | 1016543 - 1017334 | 28559.6 |
| mlad family protein | Verru16B_RS04155 | Not Available | Positive | 1017340 - 1018332 | 34478.5 |
| pqq-binding-like beta-propeller repeat protein | Verru16B_RS04160 | Not Available | Negative | 1018367 - 1019839 | 52601.7 |
| tonb-dependent receptor domain-containing protein | Verru16B_RS04165 | Not Available | Negative | 1020066 - 1022975 | 104061.0 |
| lyttr family dna-binding domain-containing protein | Verru16B_RS04170 | Not Available | Negative | 1023289 - 1024107 | 30602.2 |
| sensor histidine kinase | Verru16B_RS04175 | Not Available | Negative | 1024104 - 1025240 | 43497.3 |
| peptide abc transporter substrate-binding protein | Verru16B_RS04180 | Not Available | Negative | 1025237 - 1026889 | 60630.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
