Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS04085 | Not Available | Positive | 999519 - 1000190 | 23499.8 |
| tetratricopeptide repeat protein | Verru16B_RS04090 | Not Available | Negative | 1000393 - 1001049 | 23204.7 |
| formyltetrahydrofolate deformylase | Verru16B_RS04095 | Not Available | Negative | 1001137 - 1001991 | 31317.5 |
| carbamoyl-phosphate synthase large subunit | Verru16B_RS04100 | Not Available | Negative | 1002012 - 1005251 | 118362.0 |
| sigma-54 dependent transcriptional regulator | Verru16B_RS04105 | Not Available | Negative | 1005350 - 1006606 | 45886.5 |
| type ii secretion system f family protein | Verru16B_RS04110 | Not Available | Negative | 1006676 - 1007818 | 40765.3 |
| Trna-gly | Not Available | Not Available | Positive | 1007942 - 1008015 | Not Available |
| atp-binding protein | Verru16B_RS04120 | Not Available | Positive | 1008286 - 1012146 | 140234.0 |
| response regulator transcription factor | Verru16B_RS04125 | Not Available | Negative | 1012091 - 1012825 | 27266.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | Verru16B_RS04130 | Not Available | Positive | 1012869 - 1013588 | 26273.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
