Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | Verru16B_RS04035 | Not Available | Negative | 988967 - 989752 | 27568.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | Verru16B_RS04040 | Not Available | Negative | 989819 - 991741 | 70773.1 |
| succinate dehydrogenase cytochrome b subunit | Verru16B_RS04045 | Not Available | Negative | 991753 - 992532 | 27892.6 |
| tetratricopeptide repeat protein | Verru16B_RS04050 | Not Available | Negative | 992682 - 994412 | 63924.1 |
| pep-cterm sorting domain-containing protein | Verru16B_RS04055 | Not Available | Positive | 994483 - 995595 | 38964.1 |
| pep-cterm sorting domain-containing protein | Verru16B_RS04060 | Not Available | Positive | 995595 - 996650 | 37148.9 |
| cof synthetase | Verru16B_RS04065 | Not Available | Negative | 996631 - 997941 | 48617.6 |
| nudix hydrolase | Verru16B_RS04070 | Not Available | Negative | 997977 - 998552 | 21547.9 |
| lysm domain-containing protein | Verru16B_RS04075 | Not Available | Negative | 998616 - 999143 | 18066.0 |
| Trna-pro | Not Available | Not Available | Positive | 999351 - 999427 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
