Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | Verru16B_RS03985 | Not Available | Positive | 977764 - 980949 | 116230.0 |
| hypothetical protein | Verru16B_RS03990 | Not Available | Positive | 981001 - 981453 | 17593.7 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | Verru16B_RS03995 | Not Available | Negative | 981469 - 982509 | 36572.4 |
| diaminopimelate decarboxylase | Verru16B_RS04000 | Not Available | Negative | 982521 - 983828 | 46618.2 |
| hypothetical protein | Verru16B_RS04005 | Not Available | Positive | 983918 - 984187 | 10354.7 |
| abgt family transporter | Verru16B_RS04010 | Not Available | Positive | 984239 - 985783 | 54437.0 |
| abgt family transporter | Verru16B_RS04015 | Not Available | Positive | 985800 - 987335 | 54614.1 |
| duf4203 domain-containing protein | Verru16B_RS04020 | Not Available | Positive | 987341 - 987958 | 21313.9 |
| hypothetical protein | Verru16B_RS04025 | Not Available | Positive | 987997 - 988455 | 15980.6 |
| hypothetical protein | Verru16B_RS04030 | Not Available | Negative | 988510 - 988752 | 8502.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
