Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | Verru16B_RS03935 | Not Available | Negative | 964401 - 965609 | 44757.7 |
| duf3568 family protein | Verru16B_RS03940 | Not Available | Negative | 965935 - 966354 | 15107.5 |
| abc transporter substrate-binding protein | Verru16B_RS03945 | Not Available | Negative | 966410 - 970039 | 133916.0 |
| phzf family phenazine biosynthesis protein | Verru16B_RS03950 | Not Available | Positive | 970238 - 971023 | 27934.6 |
| duf6268 family outer membrane beta-barrel protein | Verru16B_RS03955 | Not Available | Positive | 971082 - 971963 | 31703.9 |
| plp-dependent aminotransferase family protein | Verru16B_RS03960 | Not Available | Positive | 972180 - 973643 | 54689.3 |
| dj-1/pfpi family protein | Verru16B_RS03965 | Not Available | Positive | 973845 - 974444 | 21510.0 |
| eama family transporter | Verru16B_RS03970 | Not Available | Positive | 974488 - 975471 | 34640.0 |
| hypothetical protein | Verru16B_RS03975 | Not Available | Positive | 975636 - 976001 | 12887.8 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS03980 | Not Available | Positive | 976116 - 977753 | 58570.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
