Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis tyrosine autokinase | Verru16B_RS03885 | Not Available | Negative | 952221 - 954434 | 82475.3 |
| polysaccharide biosynthesis/export family protein | Verru16B_RS03890 | Not Available | Negative | 954445 - 955035 | 22046.6 |
| outer membrane beta-barrel protein | Verru16B_RS03895 | Not Available | Negative | 955107 - 956222 | 39925.4 |
| histidinol-phosphate transaminase | Verru16B_RS03900 | Not Available | Negative | 956609 - 957706 | 38844.2 |
| had family phosphatase | Verru16B_RS03905 | Not Available | Negative | 957752 - 958345 | 21646.5 |
| sdr family nad(p)-dependent oxidoreductase | Verru16B_RS03910 | Not Available | Positive | 958460 - 959233 | 25664.7 |
| organoarsenical effux mfs transporter arsj | Verru16B_RS03915 | Not Available | Negative | 959340 - 960578 | 42870.4 |
| arsj-associated glyceraldehyde-3-phosphate dehydrogenase | Verru16B_RS03920 | Not Available | Negative | 960607 - 961626 | 36821.3 |
| helix-turn-helix transcriptional regulator | Verru16B_RS03925 | Not Available | Negative | 961623 - 962021 | 14666.2 |
| autotransporter-associated beta strand repeat-containing protein | Verru16B_RS03930 | Not Available | Negative | 962094 - 964331 | 76182.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
