Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | Verru16B_RS03645 | Not Available | Positive | 867644 - 870103 | 88932.4 |
| simpl domain-containing protein | Verru16B_RS03650 | Not Available | Positive | 870579 - 871328 | 27306.5 |
| kama family radical sam protein | Verru16B_RS03655 | Not Available | Negative | 871353 - 872540 | 45150.4 |
| response regulator | Verru16B_RS03660 | Not Available | Positive | 872771 - 875443 | 98296.3 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | Verru16B_RS03665 | Not Available | Positive | 875524 - 876696 | 42178.2 |
| methyl-accepting chemotaxis protein | Verru16B_RS03670 | Not Available | Positive | 876910 - 878835 | 68201.6 |
| hypothetical protein | Verru16B_RS03675 | Not Available | Positive | 878972 - 880507 | 56532.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | Verru16B_RS03680 | Not Available | Negative | 880542 - 881291 | 27916.7 |
| hpr family phosphocarrier protein | Verru16B_RS03685 | Not Available | Positive | 881372 - 881668 | 10739.1 |
| tatd family hydrolase | Verru16B_RS03690 | Not Available | Negative | 881777 - 882571 | 28605.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
