Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | Verru16B_RS03545 | Not Available | Negative | 840713 - 843061 | 85045.7 |
| tir domain-containing protein | Verru16B_RS03550 | Not Available | Negative | 843062 - 845404 | 86068.3 |
| hypothetical protein | Verru16B_RS03555 | Not Available | Positive | 845491 - 846975 | 54788.2 |
| duf4286 family protein | Verru16B_RS03560 | Not Available | Positive | 847120 - 847452 | 12097.5 |
| dna/rna non-specific endonuclease | Verru16B_RS03565 | Not Available | Negative | 847453 - 848409 | 35214.7 |
| tonb family protein | Verru16B_RS03570 | Not Available | Negative | 848473 - 849303 | 29910.5 |
| m48 family metallopeptidase | Verru16B_RS03575 | Not Available | Negative | 849316 - 850155 | 29831.9 |
| lipopolysaccharide assembly protein lapb | Verru16B_RS03580 | Not Available | Positive | 850348 - 852048 | 62297.9 |
| hypothetical protein | Verru16B_RS03585 | Not Available | Positive | 852053 - 852718 | 22628.5 |
| hypothetical protein | Verru16B_RS18215 | Not Available | Positive | 852729 - 853991 | 44528.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
