Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| opt family oligopeptide transporter | Verru16B_RS03245 | Not Available | Negative | 759716 - 761659 | 65892.2 |
| opt family oligopeptide transporter | Verru16B_RS03250 | Not Available | Negative | 761783 - 764074 | 79700.5 |
| 2-dehydropantoate 2-reductase | Verru16B_RS03255 | Not Available | Negative | 764202 - 765167 | 34907.8 |
| pantoate--beta-alanine ligase | Verru16B_RS03260 | Not Available | Negative | 765617 - 766459 | 30552.5 |
| ll-diaminopimelate aminotransferase | Verru16B_RS03265 | Not Available | Positive | 766621 - 767844 | 44149.6 |
| hypothetical protein | Verru16B_RS03270 | Not Available | Negative | 767929 - 768507 | 21102.4 |
| hypothetical protein | Verru16B_RS03275 | Not Available | Positive | 768641 - 768850 | 7422.32 |
| response regulator transcription factor | Verru16B_RS03280 | Not Available | Negative | 768853 - 769563 | 26194.7 |
| hypothetical protein | Verru16B_RS03285 | Not Available | Negative | 769729 - 770037 | 11577.7 |
| membrane integrity-associated transporter subunit pqic | Verru16B_RS03290 | Not Available | Negative | 770184 - 770732 | 19318.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
