Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannonate dehydratase | Verru16B_RS03140 | Not Available | Negative | 720942 - 722027 | 39809.7 |
| laci family dna-binding transcriptional regulator | Verru16B_RS03145 | Not Available | Negative | 722100 - 723125 | 38317.5 |
| glycosyl hydrolase 115 family protein | Verru16B_RS03150 | Not Available | Negative | 723190 - 727242 | 149006.0 |
| vcbs repeat-containing protein | Verru16B_RS03160 | Not Available | Positive | 727898 - 729244 | 48830.3 |
| tetratricopeptide repeat protein | Verru16B_RS03165 | Not Available | Positive | 729241 - 730674 | 51714.4 |
| hypothetical protein | Verru16B_RS03170 | Not Available | Negative | 730681 - 731214 | 19108.0 |
| fg-gap-like repeat-containing protein | Verru16B_RS03175 | Not Available | Negative | 731279 - 734734 | 123170.0 |
| fg-gap-like repeat-containing protein | Verru16B_RS19090 | Not Available | Negative | 734805 - 738248 | 122361.0 |
| hypothetical protein | Verru16B_RS03185 | Not Available | Positive | 738517 - 739533 | 35054.2 |
| hypothetical protein | Verru16B_RS03190 | Not Available | Positive | 739515 - 740789 | 45308.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
