Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | Verru16B_RS03090 | Not Available | Positive | 709456 - 710061 | 21802.3 |
| gfo/idh/moca family protein | Verru16B_RS03095 | Not Available | Negative | 710231 - 711646 | 51665.6 |
| pd40 domain-containing protein | Verru16B_RS03100 | Not Available | Negative | 711757 - 713304 | 56343.6 |
| sdr family nad(p)-dependent oxidoreductase | Verru16B_RS03105 | Not Available | Negative | 713418 - 714200 | 27226.4 |
| homocysteine s-methyltransferase family protein | Verru16B_RS03110 | Not Available | Negative | 714397 - 715308 | 31881.6 |
| virulence factor | Verru16B_RS03115 | Not Available | Negative | 715365 - 716327 | 34269.2 |
| uroporphyrinogen decarboxylase family protein | Verru16B_RS03120 | Not Available | Negative | 716428 - 717492 | 40046.5 |
| hypothetical protein | Verru16B_RS03125 | Not Available | Negative | 717579 - 717908 | 11450.3 |
| hypothetical protein | Verru16B_RS03130 | Not Available | Negative | 717928 - 719148 | 44060.1 |
| askha domain-containing protein | Verru16B_RS03135 | Not Available | Negative | 719153 - 720802 | 58764.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
