Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | Verru16B_RS02995 | Not Available | Positive | 674156 - 675586 | 52545.8 |
| mfs transporter | Verru16B_RS03000 | Not Available | Positive | 675616 - 677037 | 52365.7 |
| xylr family transcriptional regulator | Verru16B_RS03005 | Not Available | Positive | 677188 - 678348 | 43275.9 |
| tonb-dependent receptor plug domain-containing protein | Verru16B_RS03010 | Not Available | Positive | 678691 - 682257 | 130057.0 |
| vcbs repeat-containing protein | Verru16B_RS03015 | Not Available | Negative | 682811 - 686164 | 120204.0 |
| hypothetical protein | Verru16B_RS03020 | Not Available | Positive | 686299 - 688713 | 86386.3 |
| hypothetical protein | Verru16B_RS03025 | Not Available | Positive | 688784 - 691198 | 85644.0 |
| vcbs repeat-containing protein | Verru16B_RS03030 | Not Available | Positive | 691284 - 692585 | 46978.7 |
| lipopolysaccharide assembly protein lapb | Verru16B_RS03035 | Not Available | Positive | 692589 - 694019 | 52200.6 |
| l-glyceraldehyde 3-phosphate reductase | Verru16B_RS03040 | Not Available | Negative | 694016 - 695011 | 36268.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
