Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | Verru16B_RS02945 | Not Available | Positive | 658762 - 659712 | 34184.1 |
| sugar abc transporter atp-binding protein | Verru16B_RS02950 | Not Available | Positive | 659810 - 661300 | 52164.6 |
| aldose epimerase family protein | Verru16B_RS02955 | Not Available | Positive | 661317 - 662399 | 38842.2 |
| Trna-met | Not Available | Not Available | Positive | 662471 - 662547 | Not Available |
| dihydroorotate dehydrogenase-like protein | Verru16B_RS02965 | Not Available | Negative | 662860 - 663852 | 36753.1 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | Verru16B_RS02970 | Not Available | Negative | 663849 - 667517 | 130572.0 |
| acetylxylan esterase | Verru16B_RS02975 | Not Available | Positive | 667603 - 668943 | 48241.0 |
| gh1 family beta-glucosidase | Verru16B_RS02980 | Not Available | Positive | 669062 - 670423 | 51045.3 |
| glycoside hydrolase family 130 protein | Verru16B_RS02985 | Not Available | Positive | 670459 - 671448 | 36627.0 |
| glycoside hydrolase family 2 protein | Verru16B_RS02990 | Not Available | Positive | 671619 - 674135 | 95785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
