Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | Verru16B_RS00255 | Not Available | Positive | 52874 - 54811 | 73019.4 |
| hypothetical protein | Verru16B_RS00260 | Not Available | Positive | 54811 - 56412 | 58099.5 |
| class i sam-dependent methyltransferase | Verru16B_RS00265 | Not Available | Positive | 56409 - 57185 | 29173.3 |
| thioredoxin family protein | Verru16B_RS00270 | Not Available | Positive | 57270 - 57761 | 17969.5 |
| alpha/beta fold hydrolase | Verru16B_RS00275 | Not Available | Positive | 57832 - 58689 | 30347.0 |
| helix-turn-helix domain-containing protein | Verru16B_RS00280 | Not Available | Positive | 58712 - 59617 | 33826.6 |
| right-handed parallel beta-helix repeat-containing protein | Verru16B_RS00285 | Not Available | Negative | 59700 - 60743 | 37802.9 |
| gnat family n-acetyltransferase | Verru16B_RS00290 | Not Available | Negative | 60794 - 61390 | 21904.5 |
| inner membrane protein ypjd | Verru16B_RS00295 | Not Available | Positive | 61610 - 62458 | 30955.6 |
| glutamyl-trna reductase | Verru16B_RS00300 | Not Available | Positive | 62461 - 63504 | 36574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
