Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | Verru16B_RS02895 | Not Available | Positive | 646634 - 647389 | 28328.4 |
| wd40 repeat domain-containing serine/threonine protein kinase | Verru16B_RS02900 | Not Available | Positive | 647450 - 650548 | 109545.0 |
| m28 family metallopeptidase | Verru16B_RS02905 | Not Available | Positive | 650607 - 652241 | 57461.3 |
| m3 family metallopeptidase | Verru16B_RS02910 | Not Available | Negative | 652400 - 654508 | 77476.9 |
| hypothetical protein | Verru16B_RS02915 | Not Available | Negative | 654570 - 654896 | 13239.0 |
| Trna-ser | Not Available | Not Available | Positive | 655048 - 655135 | Not Available |
| duf983 domain-containing protein | Verru16B_RS02925 | Not Available | Negative | 655210 - 655617 | 15138.6 |
| translation elongation factor ts | Verru16B_RS02930 | Not Available | Negative | 655763 - 656359 | 21622.2 |
| 30s ribosomal protein s2 | Verru16B_RS02935 | Not Available | Negative | 656380 - 657243 | 31183.5 |
| abc transporter permease | Verru16B_RS02940 | Not Available | Positive | 657506 - 658624 | 38299.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
