Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | Verru16B_RS18625 | Not Available | Positive | 623765 - 625990 | 79780.8 |
| duf4198 domain-containing protein | Verru16B_RS18530 | Not Available | Positive | 626001 - 627029 | 37510.4 |
| rna 2',3'-cyclic phosphodiesterase | Verru16B_RS02810 | Not Available | Positive | 627157 - 627702 | 19722.8 |
| chromate efflux transporter | Verru16B_RS02815 | Not Available | Positive | 627822 - 629030 | 41862.9 |
| duf2478 domain-containing protein | Verru16B_RS02820 | Not Available | Positive | 629202 - 630635 | 51322.5 |
| ydiy family protein | Verru16B_RS02825 | Not Available | Negative | 630669 - 631682 | 37043.9 |
| ydiy family protein | Verru16B_RS02830 | Not Available | Negative | 631811 - 632863 | 38010.1 |
| tigr02466 family protein | Verru16B_RS02835 | Not Available | Positive | 632976 - 633593 | 23285.7 |
| nad(p)h-binding protein | Verru16B_RS02840 | Not Available | Negative | 633600 - 634268 | 24187.3 |
| hypothetical protein | Verru16B_RS02845 | Not Available | Positive | 634383 - 634817 | 15988.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
