Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ysc84-related protein | Verru16B_RS02650 | Not Available | Negative | 587517 - 588098 | 20396.8 |
| two-component system sensor histidine kinase crec | Verru16B_RS02655 | Not Available | Negative | 588159 - 589523 | 49301.5 |
| two-component system response regulator creb | Verru16B_RS02660 | Not Available | Negative | 589520 - 590215 | 25215.2 |
| hypothetical protein | Verru16B_RS02665 | Not Available | Negative | 590295 - 590564 | 9793.05 |
| sdr family oxidoreductase | Verru16B_RS02670 | Not Available | Negative | 590678 - 591388 | 25383.0 |
| porin | Verru16B_RS02675 | Not Available | Positive | 591554 - 592702 | 41106.2 |
| pdc sensor domain-containing protein | Verru16B_RS02680 | Not Available | Positive | 592724 - 593272 | 19634.6 |
| methyl-accepting chemotaxis protein | Verru16B_RS02685 | Not Available | Positive | 593287 - 594807 | 53506.8 |
| gtp cyclohydrolase fole2 | Verru16B_RS02690 | Not Available | Negative | 594947 - 595918 | 36766.5 |
| 6-carboxytetrahydropterin synthase | Verru16B_RS02695 | Not Available | Negative | 595964 - 596443 | 18338.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
