Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiid c-terminal domain-containing protein | Verru16B_RS18200 | Not Available | Positive | 579086 - 579553 | 16582.3 |
| hypothetical protein | Verru16B_RS02605 | Not Available | Positive | 579718 - 580287 | 20551.6 |
| dutpase | Verru16B_RS02610 | Not Available | Negative | 580390 - 580761 | 14487.2 |
| hypothetical protein | Verru16B_RS18095 | Not Available | Positive | 580979 - 581959 | 33321.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | Verru16B_RS02620 | Not Available | Positive | 582092 - 583384 | 46523.8 |
| holliday junction branch migration dna helicase ruvb | Verru16B_RS02625 | Not Available | Positive | 583476 - 584519 | 37287.0 |
| d-lyxose/d-mannose family sugar isomerase | Verru16B_RS02630 | Not Available | Positive | 584578 - 585153 | 21411.4 |
| peptidylprolyl isomerase | Verru16B_RS02635 | Not Available | Positive | 585150 - 585728 | 20732.0 |
| metallophosphoesterase | Verru16B_RS02640 | Not Available | Negative | 585818 - 586642 | 30243.5 |
| inner membrane cred family protein | Verru16B_RS02645 | Not Available | Negative | 586683 - 587381 | 24869.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
