Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS00205 | Not Available | Positive | 41112 - 41390 | 10506.8 |
| hypothetical protein | Verru16B_RS00210 | Not Available | Positive | 41387 - 41929 | 19580.4 |
| ribonuclease hiii | Verru16B_RS00215 | Not Available | Negative | 41934 - 42941 | 37317.7 |
| a/g-specific adenine glycosylase | Verru16B_RS00220 | Not Available | Positive | 43034 - 44071 | 38366.7 |
| nad(p)-dependent oxidoreductase | Verru16B_RS00225 | Not Available | Positive | 44270 - 45688 | 50293.6 |
| duf3817 domain-containing protein | Verru16B_RS00230 | Not Available | Negative | 45783 - 46088 | 10938.7 |
| sugar phosphate isomerase/epimerase | Verru16B_RS00235 | Not Available | Negative | 46204 - 47154 | 35392.3 |
| 30s ribosomal protein s21 | Verru16B_RS00240 | Not Available | Negative | 47413 - 47610 | 8206.35 |
| dna polymerase iii subunit alpha | Verru16B_RS00245 | Not Available | Positive | 47849 - 51406 | 131078.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | Verru16B_RS00250 | Not Available | Positive | 51507 - 52688 | 43567.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
