Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | Verru16B_RS02350 | Not Available | Negative | 528781 - 529413 | 22341.9 |
| 50s ribosomal protein l3 | Verru16B_RS02355 | Not Available | Negative | 529434 - 530075 | 22498.7 |
| 30s ribosomal protein s10 | Verru16B_RS02360 | Not Available | Negative | 530181 - 530489 | 11473.0 |
| elongation factor g | Verru16B_RS02365 | Not Available | Negative | 530516 - 532711 | 80251.7 |
| 30s ribosomal protein s7 | Verru16B_RS02370 | Not Available | Negative | 532726 - 533199 | 17798.7 |
| 30s ribosomal protein s12 | Verru16B_RS02375 | Not Available | Negative | 533221 - 533601 | 14087.5 |
| hypothetical protein | Verru16B_RS02380 | Not Available | Positive | 534201 - 535166 | 34861.7 |
| dna-directed rna polymerase subunit beta' | Verru16B_RS02385 | Not Available | Negative | 535327 - 539454 | 151966.0 |
| dna-directed rna polymerase subunit beta | Verru16B_RS02390 | Not Available | Negative | 539486 - 543292 | 141566.0 |
| 50s ribosomal protein l7/l12 | Verru16B_RS02395 | Not Available | Negative | 543504 - 543884 | 12911.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
