Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | Verru16B_RS02150 | Not Available | Negative | 501844 - 502992 | 42001.4 |
| aminodeoxychorismate/anthranilate synthase component ii | Verru16B_RS02155 | Not Available | Positive | 503055 - 503621 | 20418.7 |
| transcriptional regulator nrdr | Verru16B_RS02160 | Not Available | Positive | 503626 - 504108 | 18366.1 |
| hypothetical protein | Verru16B_RS02165 | Not Available | Positive | 504105 - 504581 | 17618.0 |
| histidine triad nucleotide-binding protein | Verru16B_RS02170 | Not Available | Positive | 504661 - 505002 | 12140.9 |
| glycine zipper domain-containing protein | Verru16B_RS02175 | Not Available | Positive | 505059 - 505589 | 18699.8 |
| dna-processing protein dpra | Verru16B_RS02180 | Not Available | Negative | 505757 - 506887 | 40230.6 |
| nad(p)h-hydrate dehydratase | Verru16B_RS02185 | Not Available | Negative | 506889 - 508460 | 53524.7 |
| holo-acp synthase | Verru16B_RS02190 | Not Available | Negative | 508470 - 508874 | 14831.0 |
| pyridoxine 5'-phosphate synthase | Verru16B_RS02195 | Not Available | Negative | 508975 - 509739 | 27516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
