Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | Verru16B_RS02100 | Not Available | Positive | 490906 - 492309 | 52657.2 |
| alpha-e domain-containing protein | Verru16B_RS02105 | Not Available | Positive | 492327 - 493370 | 39604.8 |
| transglutaminase family protein | Verru16B_RS02110 | Not Available | Positive | 493413 - 494309 | 33118.3 |
| hypothetical protein | Verru16B_RS18580 | Not Available | Negative | 494355 - 495203 | 31492.8 |
| purine nucleoside permease | Verru16B_RS02120 | Not Available | Negative | 495355 - 496350 | 36147.1 |
| udp-glucuronic acid decarboxylase family protein | Verru16B_RS02125 | Not Available | Negative | 496520 - 497446 | 34762.0 |
| cpbp family intramembrane glutamic endopeptidase | Verru16B_RS02130 | Not Available | Positive | 497595 - 498512 | 31952.7 |
| yfcc family protein | Verru16B_RS02135 | Not Available | Positive | 498573 - 499949 | 47779.6 |
| alpha-1,2-fucosyltransferase | Verru16B_RS02140 | Not Available | Positive | 499963 - 500871 | 33695.1 |
| duf268 domain-containing protein | Verru16B_RS02145 | Not Available | Positive | 501054 - 501797 | 27899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
